Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Gm5566-201ENSMUST00000116118 459 ntBASIC13.98□□□□□ -0.17
Rab28Q99KL7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Gm23547-201ENSMUST00000158210 271 ntBASIC13.98□□□□□ -0.17
Rab28Q99KL7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rab28Q99KL7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.97□□□□□ -0.17
Rab28Q99KL7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.97□□□□□ -0.17
Rab28Q99KL7 Gm15920-201ENSMUST00000118998 402 ntBASIC13.97□□□□□ -0.17
Rab28Q99KL7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.97□□□□□ -0.17
Rab28Q99KL7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rab28Q99KL7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Mir6956-201ENSMUST00000183598 62 ntBASIC13.96□□□□□ -0.17
Rab28Q99KL7 Gm28630-201ENSMUST00000187806 498 ntBASIC13.96□□□□□ -0.17
Rab28Q99KL7 Gm44872-201ENSMUST00000207864 420 ntBASIC13.96□□□□□ -0.17
Rab28Q99KL7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rab28Q99KL7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.96□□□□□ -0.17
Rab28Q99KL7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rab28Q99KL7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Rab28Q99KL7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.96□□□□□ -0.18
Rab28Q99KL7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rab28Q99KL7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Rab28Q99KL7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rab28Q99KL7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rab28Q99KL7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms