Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.2□□□□□ -0.3
Lims1Q99JW4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm16198-201ENSMUST00000118766 670 ntBASIC13.2□□□□□ -0.3
Lims1Q99JW4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm37935-201ENSMUST00000192012 982 ntBASIC13.2□□□□□ -0.3
Lims1Q99JW4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm45747-201ENSMUST00000212203 999 ntBASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lims1Q99JW4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Gm8584-201ENSMUST00000171982 758 ntBASIC13.19□□□□□ -0.3
Lims1Q99JW4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lims1Q99JW4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.18□□□□□ -0.3
Lims1Q99JW4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Mir5131-201ENSMUST00000175426 93 ntBASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.18□□□□□ -0.3
Lims1Q99JW4 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.18□□□□□ -0.3
Lims1Q99JW4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Lims1Q99JW4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.17□□□□□ -0.3
Lims1Q99JW4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms