Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Rfc4Q99J62 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfc4Q99J62 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Gm15393-201ENSMUST00000120499 219 ntBASIC16.64■□□□□ 0.25
Rfc4Q99J62 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Gm33320-201ENSMUST00000192232 530 ntBASIC16.64■□□□□ 0.25
Rfc4Q99J62 Gm6266-201ENSMUST00000203844 806 ntBASIC16.64■□□□□ 0.25
Rfc4Q99J62 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.64■□□□□ 0.25
Rfc4Q99J62 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.64■□□□□ 0.25
Rfc4Q99J62 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc4Q99J62 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfc4Q99J62 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.62■□□□□ 0.25
Rfc4Q99J62 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.62■□□□□ 0.25
Rfc4Q99J62 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.62■□□□□ 0.25
Rfc4Q99J62 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfc4Q99J62 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms