Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Gm43438-201ENSMUST00000198133 379 ntBASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Gm9908-201ENSMUST00000211534 448 ntBASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Gm6912-201ENSMUST00000117218 544 ntBASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Gm12138-201ENSMUST00000122180 951 ntBASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Gm18187-201ENSMUST00000196476 984 ntBASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb5Q91XZ5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb5Q91XZ5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Gm45384-201ENSMUST00000210451 277 ntBASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb5Q91XZ5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Gm12882-201ENSMUST00000121696 517 ntBASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 AC153872.1-201ENSMUST00000199539 128 ntBASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb5Q91XZ5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms