Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga3Q91XY5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Thap2-203ENSMUST00000218989 527 ntBASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Gm10154-201ENSMUST00000084445 354 ntBASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga3Q91XY5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms