Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim60Q8VI40 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.99□□□□□ -0.01
Trim60Q8VI40 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gm16026-204ENSMUST00000162652 683 ntBASIC14.99□□□□□ -0.01
Trim60Q8VI40 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gm27300-201ENSMUST00000184085 97 ntBASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gm27335-201ENSMUST00000184758 97 ntBASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gm28659-201ENSMUST00000188013 759 ntBASIC14.99□□□□□ -0.01
Trim60Q8VI40 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim60Q8VI40 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.98□□□□□ -0.01
Trim60Q8VI40 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.98□□□□□ -0.01
Trim60Q8VI40 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim60Q8VI40 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.98□□□□□ -0.01
Trim60Q8VI40 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.98□□□□□ -0.01
Trim60Q8VI40 Gm10154-201ENSMUST00000084445 354 ntBASIC14.98□□□□□ -0.01
Trim60Q8VI40 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim60Q8VI40 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.97□□□□□ -0.01
Trim60Q8VI40 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Gm18195-201ENSMUST00000207604 706 ntBASIC14.97□□□□□ -0.01
Trim60Q8VI40 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim60Q8VI40 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms