Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.67□□□□□ -0.22
Clrn1Q8K445 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gm12134-201ENSMUST00000122109 520 ntBASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Rprl2-201ENSMUST00000157150 290 ntBASIC13.67□□□□□ -0.22
Clrn1Q8K445 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gm24513-201ENSMUST00000174964 138 ntBASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gm27494-201ENSMUST00000184735 189 ntBASIC13.67□□□□□ -0.22
Clrn1Q8K445 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.67□□□□□ -0.22
Clrn1Q8K445 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Mir1895-201ENSMUST00000122615 79 ntBASIC13.66□□□□□ -0.22
Clrn1Q8K445 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Gm18057-201ENSMUST00000208220 503 ntBASIC13.66□□□□□ -0.22
Clrn1Q8K445 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.66□□□□□ -0.22
Clrn1Q8K445 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.66□□□□□ -0.22
Clrn1Q8K445 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn1Q8K445 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.65□□□□□ -0.22
Clrn1Q8K445 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms