Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Gm27631-201ENSMUST00000184163 466 ntBASIC15.22■□□□□ 0.03
Trim61Q8JZK6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim61Q8JZK6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.21■□□□□ 0.03
Trim61Q8JZK6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Gm29667-201ENSMUST00000190817 490 ntBASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Gm9182-201ENSMUST00000217829 639 ntBASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim61Q8JZK6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim61Q8JZK6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
Trim61Q8JZK6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim61Q8JZK6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim61Q8JZK6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim61Q8JZK6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Gm4875-201ENSMUST00000118257 786 ntBASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Gm43703-201ENSMUST00000200523 763 ntBASIC15.2■□□□□ 0.02
Trim61Q8JZK6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim61Q8JZK6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Gm3436-201ENSMUST00000179930 840 ntBASIC15.19■□□□□ 0.02
Trim61Q8JZK6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Gm45453-201ENSMUST00000211758 853 ntBASIC15.19■□□□□ 0.02
Trim61Q8JZK6 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim61Q8JZK6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim61Q8JZK6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms