Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Gm13884-201ENSMUST00000118103 829 ntBASIC12.92□□□□□ -0.34
ShfQ8CG80 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Thap2-203ENSMUST00000218989 527 ntBASIC12.92□□□□□ -0.34
ShfQ8CG80 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
ShfQ8CG80 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ShfQ8CG80 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.91□□□□□ -0.34
ShfQ8CG80 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.91□□□□□ -0.34
ShfQ8CG80 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ShfQ8CG80 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ShfQ8CG80 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.91□□□□□ -0.34
ShfQ8CG80 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.91□□□□□ -0.34
ShfQ8CG80 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Gm8584-201ENSMUST00000171982 758 ntBASIC12.91□□□□□ -0.34
ShfQ8CG80 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.91□□□□□ -0.34
ShfQ8CG80 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ShfQ8CG80 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ShfQ8CG80 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.91□□□□□ -0.34
ShfQ8CG80 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ShfQ8CG80 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.9□□□□□ -0.34
ShfQ8CG80 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ShfQ8CG80 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.9□□□□□ -0.34
ShfQ8CG80 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
ShfQ8CG80 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ShfQ8CG80 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.9□□□□□ -0.34
ShfQ8CG80 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ShfQ8CG80 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms