Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx1Q8C8B0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.85■□□□□ 0.29
Alx1Q8C8B0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Alx1Q8C8B0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Alx1Q8C8B0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.83■□□□□ 0.29
Alx1Q8C8B0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms