Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Gm11025-201ENSMUST00000140773 466 ntBASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Gm5479-201ENSMUST00000160578 435 ntBASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Gm27920-201ENSMUST00000183953 96 ntBASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf3Q8C120 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf3Q8C120 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf3Q8C120 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Sh3rf3Q8C120 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.08■□□□□ 0.01
Sh3rf3Q8C120 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.08■□□□□ 0.01
Sh3rf3Q8C120 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.08■□□□□ 0.01
Sh3rf3Q8C120 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf3Q8C120 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Gm11745-201ENSMUST00000121669 448 ntBASIC15.08■□□□□ 0
Sh3rf3Q8C120 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.08■□□□□ 0
Sh3rf3Q8C120 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.08■□□□□ 0
Sh3rf3Q8C120 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf3Q8C120 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms