Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.31■□□□□ 0.04
Trerf1Q8BXJ2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Gm25911-201ENSMUST00000157621 56 ntBASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Gm17968-201ENSMUST00000194902 784 ntBASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Gm2756-201ENSMUST00000195851 400 ntBASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trerf1Q8BXJ2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Matn2-206ENSMUST00000228570 2798 ntBASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trerf1Q8BXJ2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gm24513-201ENSMUST00000174964 138 ntBASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gm5177-201ENSMUST00000183092 997 ntBASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gm27702-201ENSMUST00000184512 56 ntBASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms