Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm15653-201ENSMUST00000119247 907 ntBASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Mir6977-201ENSMUST00000184960 64 ntBASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm27321-201ENSMUST00000185021 205 ntBASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm45453-201ENSMUST00000211758 853 ntBASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm9063-201ENSMUST00000223299 582 ntBASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap1Q8BTW8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm27631-201ENSMUST00000184163 466 ntBASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Dupd1-202ENSMUST00000224735 548 ntBASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Shd-206ENSMUST00000225145 998 ntBASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap1Q8BTW8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms