Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Gm7774-201ENSMUST00000200064 533 ntBASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab11fip4Q8BQP8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab11fip4Q8BQP8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Mir449b-201ENSMUST00000104833 80 ntBASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rab11fip4Q8BQP8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms