Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Gm13342-201ENSMUST00000121055 207 ntBASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Rps4l-202ENSMUST00000204242 789 ntBASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smg1Q8BKX6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Gm38266-201ENSMUST00000194931 421 ntBASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Cts7-204ENSMUST00000225321 1257 ntBASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.02□□□□□ -0.48
Smg1Q8BKX6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.02□□□□□ -0.48
Smg1Q8BKX6 Gm10156-201ENSMUST00000122364 462 ntBASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smg1Q8BKX6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Gm8598-201ENSMUST00000221184 836 ntBASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Gm16177-201ENSMUST00000120728 718 ntBASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Gm6916-202ENSMUST00000205523 195 ntBASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Snora73a-201ENSMUST00000082453 205 ntBASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smg1Q8BKX6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smg1Q8BKX6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smg1Q8BKX6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smg1Q8BKX6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smg1Q8BKX6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12□□□□□ -0.49
Smg1Q8BKX6 Gm16505-201ENSMUST00000179981 232 ntBASIC12□□□□□ -0.49
Smg1Q8BKX6 Gm4819-201ENSMUST00000182170 1009 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms