Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Gm13036-201ENSMUST00000117799 748 ntBASIC14□□□□□ -0.17
Rnf38Q8BI21 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Mir5126-201ENSMUST00000175513 77 ntBASIC14□□□□□ -0.17
Rnf38Q8BI21 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14□□□□□ -0.17
Rnf38Q8BI21 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14□□□□□ -0.17
Rnf38Q8BI21 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Gm12350-201ENSMUST00000121208 462 ntBASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Gm15590-201ENSMUST00000078419 552 ntBASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf38Q8BI21 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.98□□□□□ -0.17
Rnf38Q8BI21 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Gm27628-201ENSMUST00000184911 107 ntBASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf38Q8BI21 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf38Q8BI21 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms