Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnp1Q80ZI1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Gm27514-201ENSMUST00000183692 110 ntBASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Gm7399-201ENSMUST00000032395 858 ntBASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trnp1Q80ZI1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm13612-201ENSMUST00000119276 390 ntBASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm13689-201ENSMUST00000119360 685 ntBASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm6983-201ENSMUST00000214912 628 ntBASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnp1Q80ZI1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Gm5370-201ENSMUST00000187187 574 ntBASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms