Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pif1Q80SX8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm15321-201ENSMUST00000121290 288 ntBASIC13.36□□□□□ -0.27
Pif1Q80SX8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm45098-201ENSMUST00000207179 657 ntBASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm7653-201ENSMUST00000214567 508 ntBASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm6218-201ENSMUST00000219812 628 ntBASIC13.36□□□□□ -0.27
Pif1Q80SX8 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.36□□□□□ -0.27
Pif1Q80SX8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.36□□□□□ -0.27
Pif1Q80SX8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm24694-201ENSMUST00000180054 110 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm27663-201ENSMUST00000184839 110 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm9794-201ENSMUST00000202370 423 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm46209-201ENSMUST00000217912 553 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.35□□□□□ -0.27
Pif1Q80SX8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pif1Q80SX8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms