Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Gm27892-201ENSMUST00000185017 106 ntBASIC16.81■□□□□ 0.28
Nup98Q6PFD9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup98Q6PFD9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.8■□□□□ 0.28
Nup98Q6PFD9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.8■□□□□ 0.28
Nup98Q6PFD9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Gm27772-201ENSMUST00000184900 187 ntBASIC16.8■□□□□ 0.28
Nup98Q6PFD9 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.8■□□□□ 0.28
Nup98Q6PFD9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup98Q6PFD9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Gm12390-201ENSMUST00000117897 397 ntBASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms