Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ParpbpQ6IRT3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Gm6736-201ENSMUST00000166583 948 ntBASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ParpbpQ6IRT3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Gm14822-201ENSMUST00000122247 291 ntBASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Gm11025-201ENSMUST00000140773 466 ntBASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Gm25911-201ENSMUST00000157621 56 ntBASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Rpph1-201ENSMUST00000175096 319 ntBASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ParpbpQ6IRT3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms