Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SspnQ62147 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SspnQ62147 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SspnQ62147 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SspnQ62147 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
SspnQ62147 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SspnQ62147 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SspnQ62147 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SspnQ62147 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SspnQ62147 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SspnQ62147 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SspnQ62147 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SspnQ62147 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
SspnQ62147 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.15□□□□□ -0.47
SspnQ62147 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
SspnQ62147 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
SspnQ62147 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
SspnQ62147 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
SspnQ62147 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.14□□□□□ -0.47
SspnQ62147 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.14□□□□□ -0.47
SspnQ62147 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.14□□□□□ -0.47
SspnQ62147 Gm12008-201ENSMUST00000117791 755 ntBASIC12.14□□□□□ -0.47
SspnQ62147 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.14□□□□□ -0.47
SspnQ62147 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.14□□□□□ -0.47
SspnQ62147 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SspnQ62147 Gm27300-201ENSMUST00000184085 97 ntBASIC12.14□□□□□ -0.47
SspnQ62147 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.14□□□□□ -0.47
SspnQ62147 Gm27335-201ENSMUST00000184758 97 ntBASIC12.14□□□□□ -0.47
SspnQ62147 Gm2651-201ENSMUST00000203560 838 ntBASIC12.14□□□□□ -0.47
SspnQ62147 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.14□□□□□ -0.47
SspnQ62147 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.14□□□□□ -0.47
SspnQ62147 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SspnQ62147 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SspnQ62147 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.14□□□□□ -0.47
SspnQ62147 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SspnQ62147 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SspnQ62147 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SspnQ62147 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.13□□□□□ -0.47
SspnQ62147 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SspnQ62147 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SspnQ62147 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
SspnQ62147 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SspnQ62147 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.13□□□□□ -0.47
SspnQ62147 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SspnQ62147 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.13□□□□□ -0.47
SspnQ62147 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.13□□□□□ -0.47
SspnQ62147 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.13□□□□□ -0.47
SspnQ62147 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.13□□□□□ -0.47
SspnQ62147 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SspnQ62147 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SspnQ62147 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.13□□□□□ -0.47
SspnQ62147 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.13□□□□□ -0.47
SspnQ62147 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SspnQ62147 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.13□□□□□ -0.47
SspnQ62147 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.12□□□□□ -0.47
SspnQ62147 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms