Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.08■□□□□ 0.32
Ctr9Q62018 Gm13453-201ENSMUST00000118708 357 ntBASIC17.08■□□□□ 0.32
Ctr9Q62018 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.08■□□□□ 0.32
Ctr9Q62018 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ctr9Q62018 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ctr9Q62018 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.08■□□□□ 0.32
Ctr9Q62018 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.08■□□□□ 0.32
Ctr9Q62018 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctr9Q62018 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ctr9Q62018 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ctr9Q62018 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctr9Q62018 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctr9Q62018 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.07■□□□□ 0.32
Ctr9Q62018 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.07■□□□□ 0.32
Ctr9Q62018 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.07■□□□□ 0.32
Ctr9Q62018 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctr9Q62018 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.06■□□□□ 0.32
Ctr9Q62018 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ctr9Q62018 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctr9Q62018 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ctr9Q62018 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.05■□□□□ 0.32
Ctr9Q62018 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Gm24543-201ENSMUST00000103867 82 ntBASIC17.05■□□□□ 0.32
Ctr9Q62018 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ctr9Q62018 Gm12151-201ENSMUST00000121374 290 ntBASIC17.05■□□□□ 0.32
Ctr9Q62018 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ctr9Q62018 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.05■□□□□ 0.32
Ctr9Q62018 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ctr9Q62018 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ctr9Q62018 Gm27631-201ENSMUST00000184163 466 ntBASIC17.05■□□□□ 0.32
Ctr9Q62018 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.05■□□□□ 0.32
Ctr9Q62018 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.05■□□□□ 0.32
Ctr9Q62018 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctr9Q62018 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms