Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Gm11331-201ENSMUST00000119764 288 ntBASIC19.13■□□□□ 0.65
Gli3Q61602 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC19.13■□□□□ 0.65
Gli3Q61602 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC19.13■□□□□ 0.65
Gli3Q61602 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC19.13■□□□□ 0.65
Gli3Q61602 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC19.12■□□□□ 0.65
Gli3Q61602 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Gli3Q61602 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC19.12■□□□□ 0.65
Gli3Q61602 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC19.12■□□□□ 0.65
Gli3Q61602 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Gli3Q61602 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC19.12■□□□□ 0.65
Gli3Q61602 Itm2b-204ENSMUST00000228637 783 ntBASIC19.12■□□□□ 0.65
Gli3Q61602 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gli3Q61602 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC19.12■□□□□ 0.65
Gli3Q61602 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli3Q61602 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC19.11■□□□□ 0.65
Gli3Q61602 Gm11400-201ENSMUST00000120853 1214 ntBASIC19.11■□□□□ 0.65
Gli3Q61602 Gm7809-201ENSMUST00000153199 742 ntBASIC19.11■□□□□ 0.65
Gli3Q61602 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC19.11■□□□□ 0.65
Gli3Q61602 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC19.11■□□□□ 0.65
Gli3Q61602 Gm19208-201ENSMUST00000213861 912 ntBASIC19.11■□□□□ 0.65
Gli3Q61602 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC19.11■□□□□ 0.65
Gli3Q61602 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Gm13730-201ENSMUST00000121036 1462 ntBASIC19.11■□□□□ 0.65
Gli3Q61602 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Gli3Q61602 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli3Q61602 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gli3Q61602 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Gli3Q61602 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC19.1■□□□□ 0.65
Gli3Q61602 Gm3890-201ENSMUST00000182416 207 ntBASIC19.1■□□□□ 0.65
Gli3Q61602 Gm37835-201ENSMUST00000193305 361 ntBASIC19.1■□□□□ 0.65
Gli3Q61602 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC19.1■□□□□ 0.65
Gli3Q61602 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC19.1■□□□□ 0.65
Gli3Q61602 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC19.1■□□□□ 0.65
Gli3Q61602 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Gli3Q61602 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
Gli3Q61602 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gli3Q61602 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gli3Q61602 Gm11591-201ENSMUST00000120063 702 ntBASIC19.1■□□□□ 0.65
Gli3Q61602 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC19.1■□□□□ 0.65
Gli3Q61602 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC19.1■□□□□ 0.65
Gli3Q61602 Gm5869-201ENSMUST00000200248 1257 ntBASIC19.1■□□□□ 0.65
Gli3Q61602 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli3Q61602 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Gm13859-201ENSMUST00000119936 1423 ntBASIC19.09■□□□□ 0.65
Gli3Q61602 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Gli3Q61602 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 AC114543.1-201ENSMUST00000226451 1558 ntBASIC19.09■□□□□ 0.65
Gli3Q61602 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC19.09■□□□□ 0.65
Gli3Q61602 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms