Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Gm15240-201ENSMUST00000118156 720 ntBASIC12.04□□□□□ -0.48
Hcfc1Q61191 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.04□□□□□ -0.48
Hcfc1Q61191 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Hcfc1Q61191 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.04□□□□□ -0.48
Hcfc1Q61191 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.03□□□□□ -0.48
Hcfc1Q61191 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm8652-201ENSMUST00000181363 964 ntBASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm15198-201ENSMUST00000117283 177 ntBASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Gm7287-201ENSMUST00000205267 602 ntBASIC12.03□□□□□ -0.48
Hcfc1Q61191 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcfc1Q61191 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcfc1Q61191 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Hcfc1Q61191 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcfc1Q61191 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcfc1Q61191 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Hcfc1Q61191 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcfc1Q61191 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcfc1Q61191 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Gm8598-201ENSMUST00000221184 836 ntBASIC12.02□□□□□ -0.49
Hcfc1Q61191 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 BC037039-201ENSMUST00000192003 2205 ntBASIC12.02□□□□□ -0.49
Hcfc1Q61191 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.02□□□□□ -0.49
Hcfc1Q61191 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Hcfc1Q61191 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.01□□□□□ -0.49
Hcfc1Q61191 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.01□□□□□ -0.49
Hcfc1Q61191 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.01□□□□□ -0.49
Hcfc1Q61191 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hcfc1Q61191 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms