Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Urb1Q571H0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Mir1247-201ENSMUST00000116706 82 ntBASIC13.34□□□□□ -0.27
Urb1Q571H0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Urb1Q571H0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Urb1Q571H0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Urb1Q571H0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.34□□□□□ -0.27
Urb1Q571H0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Urb1Q571H0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Urb1Q571H0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Urb1Q571H0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Urb1Q571H0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Urb1Q571H0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Gm16476-201ENSMUST00000221544 139 ntBASIC13.33□□□□□ -0.28
Urb1Q571H0 Gm9229-201ENSMUST00000222777 126 ntBASIC13.33□□□□□ -0.28
Urb1Q571H0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.33□□□□□ -0.28
Urb1Q571H0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Urb1Q571H0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Urb1Q571H0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Urb1Q571H0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Urb1Q571H0 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.33□□□□□ -0.28
Urb1Q571H0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Urb1Q571H0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.32□□□□□ -0.28
Urb1Q571H0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Gm27892-201ENSMUST00000185017 106 ntBASIC13.32□□□□□ -0.28
Urb1Q571H0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Urb1Q571H0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.32□□□□□ -0.28
Urb1Q571H0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Urb1Q571H0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.32□□□□□ -0.28
Urb1Q571H0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Urb1Q571H0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.31□□□□□ -0.28
Urb1Q571H0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Urb1Q571H0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Urb1Q571H0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Urb1Q571H0 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.3□□□□□ -0.28
Urb1Q571H0 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.3□□□□□ -0.28
Urb1Q571H0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Urb1Q571H0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Urb1Q571H0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Urb1Q571H0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Urb1Q571H0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Urb1Q571H0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms