Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Gm16215-201ENSMUST00000161990 637 ntBASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Gm9229-201ENSMUST00000222777 126 ntBASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prpf38aQ4FK66 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prpf38aQ4FK66 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prpf38aQ4FK66 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Gm4875-201ENSMUST00000118257 786 ntBASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38aQ4FK66 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Gm29667-201ENSMUST00000190817 490 ntBASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38aQ4FK66 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm14042-201ENSMUST00000120139 833 ntBASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm15321-201ENSMUST00000121290 288 ntBASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm24694-201ENSMUST00000180054 110 ntBASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm27663-201ENSMUST00000184839 110 ntBASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms