Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nlrc4Q3UP24 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Gm6415-201ENSMUST00000118488 348 ntBASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nlrc4Q3UP24 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Gm10275-202ENSMUST00000168697 495 ntBASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Gm10275-201ENSMUST00000092620 635 ntBASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.25■□□□□ 0.03
Nlrc4Q3UP24 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Gm14042-201ENSMUST00000120139 833 ntBASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Gm22175-201ENSMUST00000175007 78 ntBASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nlrc4Q3UP24 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms