Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fndc4Q3TR08 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gm18489-201ENSMUST00000172565 551 ntBASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fndc4Q3TR08 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Mzt1-203ENSMUST00000227948 952 ntBASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fndc4Q3TR08 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.36□□□□□ -0.43
Fndc4Q3TR08 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Fndc4Q3TR08 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms