Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chrna5Q2MKA5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chrna5Q2MKA5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm15240-201ENSMUST00000118156 720 ntBASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm8652-201ENSMUST00000181363 964 ntBASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm17794-201ENSMUST00000220252 955 ntBASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chrna5Q2MKA5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chrna5Q2MKA5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Gm4804-201ENSMUST00000182234 999 ntBASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms