Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm24830-201ENSMUST00000102024 166 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm23200-201ENSMUST00000104379 132 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm25951-201ENSMUST00000175330 64 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm25890-201ENSMUST00000177643 165 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm22614-201ENSMUST00000178300 165 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm22042-201ENSMUST00000082989 165 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm26232-201ENSMUST00000083360 166 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm24136-201ENSMUST00000083374 165 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Gm26110-201ENSMUST00000083971 165 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.83□□□□□ -0.36
Chd8Q09XV5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.82□□□□□ -0.36
Chd8Q09XV5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Gm11964-201ENSMUST00000120982 444 ntBASIC12.82□□□□□ -0.36
Chd8Q09XV5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Gm45098-201ENSMUST00000207179 657 ntBASIC12.82□□□□□ -0.36
Chd8Q09XV5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd8Q09XV5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.81□□□□□ -0.36
Chd8Q09XV5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.81□□□□□ -0.36
Chd8Q09XV5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Gm7902-201ENSMUST00000198842 947 ntBASIC12.81□□□□□ -0.36
Chd8Q09XV5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.81□□□□□ -0.36
Chd8Q09XV5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd8Q09XV5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms