Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Col6a2Q02788 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 Gm24543-201ENSMUST00000103867 82 ntBASIC14.46□□□□□ -0.09
Col6a2Q02788 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.46□□□□□ -0.09
Col6a2Q02788 Gm5566-201ENSMUST00000116118 459 ntBASIC14.46□□□□□ -0.09
Col6a2Q02788 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.46□□□□□ -0.09
Col6a2Q02788 Gm25144-201ENSMUST00000179561 110 ntBASIC14.46□□□□□ -0.09
Col6a2Q02788 Gm25352-201ENSMUST00000179815 110 ntBASIC14.46□□□□□ -0.09
Col6a2Q02788 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.46□□□□□ -0.09
Col6a2Q02788 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.46□□□□□ -0.09
Col6a2Q02788 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.46□□□□□ -0.09
Col6a2Q02788 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a2Q02788 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a2Q02788 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a2Q02788 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a2Q02788 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Gm6222-201ENSMUST00000120787 396 ntBASIC14.45□□□□□ -0.1
Col6a2Q02788 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a2Q02788 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Gm27533-201ENSMUST00000183800 152 ntBASIC14.45□□□□□ -0.1
Col6a2Q02788 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.45□□□□□ -0.1
Col6a2Q02788 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a2Q02788 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.45□□□□□ -0.1
Col6a2Q02788 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.44□□□□□ -0.1
Col6a2Q02788 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a2Q02788 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a2Q02788 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.44□□□□□ -0.1
Col6a2Q02788 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a2Q02788 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.44□□□□□ -0.1
Col6a2Q02788 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Gm27989-201ENSMUST00000184721 107 ntBASIC14.44□□□□□ -0.1
Col6a2Q02788 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.44□□□□□ -0.1
Col6a2Q02788 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.44□□□□□ -0.1
Col6a2Q02788 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a2Q02788 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Carlr-201ENSMUST00000181515 2574 ntBASIC14.44□□□□□ -0.1
Col6a2Q02788 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a2Q02788 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms