Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Gm23935-201ENSMUST00000102303 57 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Gm24270-201ENSMUST00000102326 57 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Gm25287-201ENSMUST00000103846 110 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Gm22918-201ENSMUST00000103855 110 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Gm24245-201ENSMUST00000157318 57 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Gm27397-201ENSMUST00000184997 107 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Gm43474-201ENSMUST00000196415 774 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Trim43cP86449 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim43cP86449 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim43cP86449 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.74■□□□□ 0.11
Trim43cP86449 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trim43cP86449 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim43cP86449 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim43cP86449 Gm38225-201ENSMUST00000194001 393 ntBASIC15.74■□□□□ 0.11
Trim43cP86449 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.74■□□□□ 0.11
Trim43cP86449 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.74■□□□□ 0.11
Trim43cP86449 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim43cP86449 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trim43cP86449 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim43cP86449 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim43cP86449 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim43cP86449 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trim43cP86449 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Gm22065-201ENSMUST00000103753 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm22066-201ENSMUST00000103761 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24932-201ENSMUST00000103763 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24115-201ENSMUST00000103799 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm22190-201ENSMUST00000103827 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm22191-201ENSMUST00000103831 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24721-201ENSMUST00000103849 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm28018-201ENSMUST00000103869 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm26399-201ENSMUST00000103937 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim43cP86449 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim43cP86449 Gm25349-201ENSMUST00000177728 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm23616-201ENSMUST00000177797 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm25871-201ENSMUST00000177816 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24752-201ENSMUST00000178240 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24496-201ENSMUST00000178287 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm25649-201ENSMUST00000178476 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm25548-201ENSMUST00000178681 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm23147-201ENSMUST00000178841 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm26095-201ENSMUST00000179270 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm22171-201ENSMUST00000179283 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm23936-201ENSMUST00000179354 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm22619-201ENSMUST00000179516 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm25255-201ENSMUST00000179579 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24755-201ENSMUST00000179691 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm26506-201ENSMUST00000179692 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm25086-201ENSMUST00000179931 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm23243-201ENSMUST00000180047 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24659-201ENSMUST00000180212 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm24169-201ENSMUST00000180244 110 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms