Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
RoraP51448 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
RoraP51448 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RoraP51448 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.71□□□□□ -0.21
RoraP51448 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.71□□□□□ -0.21
RoraP51448 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.71□□□□□ -0.21
RoraP51448 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.71□□□□□ -0.21
RoraP51448 Gm2451-201ENSMUST00000199447 999 ntBASIC13.71□□□□□ -0.21
RoraP51448 Gm10290-201ENSMUST00000200451 999 ntBASIC13.71□□□□□ -0.21
RoraP51448 Gm45098-201ENSMUST00000207179 657 ntBASIC13.71□□□□□ -0.21
RoraP51448 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RoraP51448 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RoraP51448 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RoraP51448 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RoraP51448 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.71□□□□□ -0.22
RoraP51448 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RoraP51448 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RoraP51448 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.7□□□□□ -0.22
RoraP51448 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.7□□□□□ -0.22
RoraP51448 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.7□□□□□ -0.22
RoraP51448 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RoraP51448 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.7□□□□□ -0.22
RoraP51448 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.7□□□□□ -0.22
RoraP51448 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RoraP51448 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.7□□□□□ -0.22
RoraP51448 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.7□□□□□ -0.22
RoraP51448 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.7□□□□□ -0.22
RoraP51448 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
RoraP51448 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RoraP51448 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.69□□□□□ -0.22
RoraP51448 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RoraP51448 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RoraP51448 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.69□□□□□ -0.22
RoraP51448 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RoraP51448 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RoraP51448 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RoraP51448 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.69□□□□□ -0.22
RoraP51448 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Gm27533-201ENSMUST00000183800 152 ntBASIC13.69□□□□□ -0.22
RoraP51448 Gm27989-201ENSMUST00000184721 107 ntBASIC13.69□□□□□ -0.22
RoraP51448 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.69□□□□□ -0.22
RoraP51448 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.69□□□□□ -0.22
RoraP51448 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
RoraP51448 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RoraP51448 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RoraP51448 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RoraP51448 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.68□□□□□ -0.22
RoraP51448 Gm5566-201ENSMUST00000116118 459 ntBASIC13.68□□□□□ -0.22
RoraP51448 Gm12428-201ENSMUST00000119844 727 ntBASIC13.68□□□□□ -0.22
RoraP51448 Gm14767-201ENSMUST00000121559 586 ntBASIC13.68□□□□□ -0.22
RoraP51448 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RoraP51448 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms