Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Atoh1P48985 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atoh1P48985 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atoh1P48985 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atoh1P48985 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atoh1P48985 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atoh1P48985 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atoh1P48985 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atoh1P48985 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.25■□□□□ 0.19
Atoh1P48985 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Atoh1P48985 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atoh1P48985 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atoh1P48985 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.24■□□□□ 0.19
Atoh1P48985 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.24■□□□□ 0.19
Atoh1P48985 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.24■□□□□ 0.19
Atoh1P48985 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.24■□□□□ 0.19
Atoh1P48985 Gm19078-201ENSMUST00000206311 727 ntBASIC16.24■□□□□ 0.19
Atoh1P48985 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.24■□□□□ 0.19
Atoh1P48985 Gm9257-201ENSMUST00000221254 232 ntBASIC16.24■□□□□ 0.19
Atoh1P48985 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atoh1P48985 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.24■□□□□ 0.19
Atoh1P48985 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Atoh1P48985 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Atoh1P48985 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atoh1P48985 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Atoh1P48985 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Atoh1P48985 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.23■□□□□ 0.19
Atoh1P48985 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.23■□□□□ 0.19
Atoh1P48985 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.23■□□□□ 0.19
Atoh1P48985 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.23■□□□□ 0.19
Atoh1P48985 Gm29649-201ENSMUST00000185649 419 ntBASIC16.23■□□□□ 0.19
Atoh1P48985 Gm43179-201ENSMUST00000198797 275 ntBASIC16.23■□□□□ 0.19
Atoh1P48985 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
Atoh1P48985 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.23■□□□□ 0.19
Atoh1P48985 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.23■□□□□ 0.19
Atoh1P48985 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
Atoh1P48985 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atoh1P48985 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Atoh1P48985 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.22■□□□□ 0.19
Atoh1P48985 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.22■□□□□ 0.19
Atoh1P48985 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.22■□□□□ 0.19
Atoh1P48985 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.22■□□□□ 0.19
Atoh1P48985 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.22■□□□□ 0.19
Atoh1P48985 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm11524-201ENSMUST00000119349 807 ntBASIC16.22■□□□□ 0.19
Atoh1P48985 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.22■□□□□ 0.19
Atoh1P48985 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atoh1P48985 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atoh1P48985 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm29127-201ENSMUST00000188304 517 ntBASIC16.22■□□□□ 0.19
Atoh1P48985 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.22■□□□□ 0.19
Atoh1P48985 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.22■□□□□ 0.19
Atoh1P48985 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.22■□□□□ 0.19
Atoh1P48985 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atoh1P48985 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.22■□□□□ 0.19
Atoh1P48985 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atoh1P48985 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms