Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Brca1P48754 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Brca1P48754 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.99■□□□□ 0.15
Brca1P48754 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Brca1P48754 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Brca1P48754 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Brca1P48754 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.99■□□□□ 0.15
Brca1P48754 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Brca1P48754 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Brca1P48754 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.99■□□□□ 0.15
Brca1P48754 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.99■□□□□ 0.15
Brca1P48754 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.99■□□□□ 0.15
Brca1P48754 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.98■□□□□ 0.15
Brca1P48754 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Gm18056-201ENSMUST00000207670 568 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Gm18061-201ENSMUST00000208350 562 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Gm18063-201ENSMUST00000208529 568 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Gm18052-201ENSMUST00000208750 559 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.98■□□□□ 0.15
Brca1P48754 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Brca1P48754 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.98■□□□□ 0.15
Brca1P48754 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Brca1P48754 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Gm6152-201ENSMUST00000151704 340 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Brca1P48754 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Brca1P48754 Gm43133-201ENSMUST00000197472 463 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Gm3786-201ENSMUST00000202659 378 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Brca1P48754 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.98■□□□□ 0.15
Brca1P48754 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Brca1P48754 Gm4857-201ENSMUST00000192718 785 ntBASIC15.97■□□□□ 0.15
Brca1P48754 Gm43822-201ENSMUST00000200285 476 ntBASIC15.97■□□□□ 0.15
Brca1P48754 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Brca1P48754 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Brca1P48754 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.97■□□□□ 0.15
Brca1P48754 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Brca1P48754 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Brca1P48754 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.96■□□□□ 0.15
Brca1P48754 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Brca1P48754 Gm29649-201ENSMUST00000185649 419 ntBASIC15.96■□□□□ 0.15
Brca1P48754 Gm29199-201ENSMUST00000187766 775 ntBASIC15.96■□□□□ 0.15
Brca1P48754 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.96■□□□□ 0.15
Brca1P48754 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.96■□□□□ 0.15
Brca1P48754 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Brca1P48754 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.96■□□□□ 0.15
Brca1P48754 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Brca1P48754 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Brca1P48754 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Brca1P48754 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.96■□□□□ 0.14
Brca1P48754 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Brca1P48754 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.96■□□□□ 0.14
Brca1P48754 Gm22331-201ENSMUST00000158066 136 ntBASIC15.96■□□□□ 0.14
Brca1P48754 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Brca1P48754 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms