Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 Gm12350-201ENSMUST00000121208 462 ntBASIC13.1□□□□□ -0.31
Rfx3P48381 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.1□□□□□ -0.31
Rfx3P48381 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Rfx3P48381 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rfx3P48381 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.1□□□□□ -0.31
Rfx3P48381 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfx3P48381 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.09□□□□□ -0.31
Rfx3P48381 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.09□□□□□ -0.31
Rfx3P48381 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.09□□□□□ -0.31
Rfx3P48381 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 Gm27300-201ENSMUST00000184085 97 ntBASIC13.09□□□□□ -0.31
Rfx3P48381 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.09□□□□□ -0.31
Rfx3P48381 Gm27335-201ENSMUST00000184758 97 ntBASIC13.09□□□□□ -0.31
Rfx3P48381 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.09□□□□□ -0.31
Rfx3P48381 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.09□□□□□ -0.31
Rfx3P48381 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.09□□□□□ -0.31
Rfx3P48381 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.09□□□□□ -0.31
Rfx3P48381 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfx3P48381 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.08□□□□□ -0.31
Rfx3P48381 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rfx3P48381 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rfx3P48381 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rfx3P48381 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rfx3P48381 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rfx3P48381 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rfx3P48381 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.08□□□□□ -0.32
Rfx3P48381 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rfx3P48381 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.08□□□□□ -0.32
Rfx3P48381 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.08□□□□□ -0.32
Rfx3P48381 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.08□□□□□ -0.32
Rfx3P48381 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms