Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.54□□□□□ -0.4
TgfaP48030 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.54□□□□□ -0.4
TgfaP48030 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.54□□□□□ -0.4
TgfaP48030 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.54□□□□□ -0.4
TgfaP48030 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TgfaP48030 Gm5356-201ENSMUST00000093326 615 ntBASIC12.54□□□□□ -0.4
TgfaP48030 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TgfaP48030 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TgfaP48030 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TgfaP48030 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TgfaP48030 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.53□□□□□ -0.4
TgfaP48030 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TgfaP48030 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
TgfaP48030 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.53□□□□□ -0.4
TgfaP48030 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.53□□□□□ -0.4
TgfaP48030 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.53□□□□□ -0.4
TgfaP48030 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.53□□□□□ -0.4
TgfaP48030 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.53□□□□□ -0.4
TgfaP48030 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.53□□□□□ -0.4
TgfaP48030 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TgfaP48030 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
TgfaP48030 BC001981-202ENSMUST00000191393 1545 ntBASIC12.52□□□□□ -0.4
TgfaP48030 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TgfaP48030 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
TgfaP48030 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TgfaP48030 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TgfaP48030 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TgfaP48030 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.52□□□□□ -0.4
TgfaP48030 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TgfaP48030 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TgfaP48030 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.52□□□□□ -0.4
TgfaP48030 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TgfaP48030 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.52□□□□□ -0.4
TgfaP48030 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TgfaP48030 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.52□□□□□ -0.41
TgfaP48030 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.52□□□□□ -0.41
TgfaP48030 Mir1982-201ENSMUST00000157368 74 ntBASIC12.52□□□□□ -0.41
TgfaP48030 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.52□□□□□ -0.41
TgfaP48030 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.52□□□□□ -0.41
TgfaP48030 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 App-207ENSMUST00000227737 2827 ntBASIC12.52□□□□□ -0.41
TgfaP48030 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TgfaP48030 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.52□□□□□ -0.41
TgfaP48030 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.52□□□□□ -0.41
TgfaP48030 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.52□□□□□ -0.41
TgfaP48030 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TgfaP48030 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TgfaP48030 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TgfaP48030 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms