Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vps4bP46467 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Vps4bP46467 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps4bP46467 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps4bP46467 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Gm10576-201ENSMUST00000191927 825 ntBASIC14.71□□□□□ -0.05
Vps4bP46467 Olfr286-202ENSMUST00000205305 969 ntBASIC14.71□□□□□ -0.05
Vps4bP46467 Gm9182-201ENSMUST00000217829 639 ntBASIC14.71□□□□□ -0.05
Vps4bP46467 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Vps4bP46467 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Vps4bP46467 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps4bP46467 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps4bP46467 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps4bP46467 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps4bP46467 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps4bP46467 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps4bP46467 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps4bP46467 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps4bP46467 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Vps4bP46467 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Gm24513-201ENSMUST00000174964 138 ntBASIC14.7□□□□□ -0.06
Vps4bP46467 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps4bP46467 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.7□□□□□ -0.06
Vps4bP46467 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.7□□□□□ -0.06
Vps4bP46467 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps4bP46467 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps4bP46467 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.7□□□□□ -0.06
Vps4bP46467 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps4bP46467 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps4bP46467 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vps4bP46467 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps4bP46467 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.69□□□□□ -0.06
Vps4bP46467 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.69□□□□□ -0.06
Vps4bP46467 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps4bP46467 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps4bP46467 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps4bP46467 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms