Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.12■□□□□ 0.01
HttP42859 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.12■□□□□ 0.01
HttP42859 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
HttP42859 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HttP42859 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HttP42859 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HttP42859 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.11■□□□□ 0.01
HttP42859 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Gm38223-201ENSMUST00000194484 695 ntBASIC15.11■□□□□ 0.01
HttP42859 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.11■□□□□ 0.01
HttP42859 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.11■□□□□ 0.01
HttP42859 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.11■□□□□ 0.01
HttP42859 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HttP42859 Gm25261-201ENSMUST00000157416 134 ntBASIC15.11■□□□□ 0.01
HttP42859 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.11■□□□□ 0.01
HttP42859 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
HttP42859 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HttP42859 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HttP42859 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.1■□□□□ 0.01
HttP42859 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HttP42859 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.1■□□□□ 0.01
HttP42859 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.1■□□□□ 0.01
HttP42859 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.1■□□□□ 0.01
HttP42859 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HttP42859 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.1■□□□□ 0.01
HttP42859 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HttP42859 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.1■□□□□ 0.01
HttP42859 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.1■□□□□ 0.01
HttP42859 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.1■□□□□ 0.01
HttP42859 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HttP42859 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Gm13369-201ENSMUST00000119442 987 ntBASIC15.1■□□□□ 0.01
HttP42859 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.1■□□□□ 0.01
HttP42859 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.1■□□□□ 0.01
HttP42859 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.1■□□□□ 0.01
HttP42859 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.1■□□□□ 0.01
HttP42859 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HttP42859 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.09■□□□□ 0.01
HttP42859 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.09■□□□□ 0.01
HttP42859 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
HttP42859 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.09■□□□□ 0.01
HttP42859 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HttP42859 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HttP42859 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HttP42859 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
HttP42859 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.09■□□□□ 0.01
HttP42859 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HttP42859 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Gm8959-201ENSMUST00000213150 571 ntBASIC15.09■□□□□ 0.01
HttP42859 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.09■□□□□ 0.01
HttP42859 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HttP42859 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HttP42859 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HttP42859 Gm15371-201ENSMUST00000117057 784 ntBASIC15.08■□□□□ 0.01
HttP42859 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.08■□□□□ 0.01
HttP42859 Gm8285-201ENSMUST00000208293 759 ntBASIC15.08■□□□□ 0.01
HttP42859 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.08■□□□□ 0.01
HttP42859 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.08■□□□□ 0.01
HttP42859 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
HttP42859 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
HttP42859 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms