Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cxcl12P40224 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.81□□□□□ -0.04
Cxcl12P40224 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Cxcl12P40224 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.81□□□□□ -0.04
Cxcl12P40224 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.81□□□□□ -0.04
Cxcl12P40224 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.81□□□□□ -0.04
Cxcl12P40224 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.8□□□□□ -0.04
Cxcl12P40224 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Gm12882-201ENSMUST00000121696 517 ntBASIC14.8□□□□□ -0.04
Cxcl12P40224 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.8□□□□□ -0.04
Cxcl12P40224 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Gm27243-201ENSMUST00000183964 521 ntBASIC14.8□□□□□ -0.04
Cxcl12P40224 Gm43094-201ENSMUST00000196549 921 ntBASIC14.8□□□□□ -0.04
Cxcl12P40224 Gm19078-201ENSMUST00000206311 727 ntBASIC14.8□□□□□ -0.04
Cxcl12P40224 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl12P40224 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cxcl12P40224 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cxcl12P40224 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.79□□□□□ -0.04
Cxcl12P40224 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm15957-201ENSMUST00000118893 974 ntBASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm11524-201ENSMUST00000119349 807 ntBASIC14.79□□□□□ -0.04
Cxcl12P40224 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm38671-201ENSMUST00000200573 130 ntBASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm43818-201ENSMUST00000200605 466 ntBASIC14.79□□□□□ -0.04
Cxcl12P40224 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.79□□□□□ -0.04
Cxcl12P40224 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.79□□□□□ -0.04
Cxcl12P40224 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 App-207ENSMUST00000227737 2827 ntBASIC14.79□□□□□ -0.04
Cxcl12P40224 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl12P40224 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.78□□□□□ -0.04
Cxcl12P40224 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.78□□□□□ -0.04
Cxcl12P40224 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl12P40224 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.78□□□□□ -0.04
Cxcl12P40224 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl12P40224 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.78□□□□□ -0.04
Cxcl12P40224 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms