Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
LdlrP35951 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LdlrP35951 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.42□□□□□ -0.1
LdlrP35951 Gm14057-201ENSMUST00000120631 482 ntBASIC14.42□□□□□ -0.1
LdlrP35951 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LdlrP35951 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.42□□□□□ -0.1
LdlrP35951 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LdlrP35951 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.42□□□□□ -0.1
LdlrP35951 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LdlrP35951 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LdlrP35951 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.41□□□□□ -0.1
LdlrP35951 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.41□□□□□ -0.1
LdlrP35951 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LdlrP35951 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.41□□□□□ -0.1
LdlrP35951 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.41□□□□□ -0.1
LdlrP35951 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.41□□□□□ -0.1
LdlrP35951 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LdlrP35951 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.41□□□□□ -0.1
LdlrP35951 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.41□□□□□ -0.1
LdlrP35951 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LdlrP35951 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LdlrP35951 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LdlrP35951 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LdlrP35951 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LdlrP35951 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LdlrP35951 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.4□□□□□ -0.1
LdlrP35951 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.4□□□□□ -0.1
LdlrP35951 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.4□□□□□ -0.1
LdlrP35951 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.4□□□□□ -0.1
LdlrP35951 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.4□□□□□ -0.1
LdlrP35951 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LdlrP35951 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.4□□□□□ -0.1
LdlrP35951 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LdlrP35951 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LdlrP35951 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LdlrP35951 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LdlrP35951 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms