Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.58□□□□□ -0.24
RetP35546 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.58□□□□□ -0.24
RetP35546 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RetP35546 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RetP35546 Gm9385-201ENSMUST00000117563 472 ntBASIC13.58□□□□□ -0.24
RetP35546 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RetP35546 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.58□□□□□ -0.24
RetP35546 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.58□□□□□ -0.24
RetP35546 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RetP35546 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.58□□□□□ -0.24
RetP35546 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RetP35546 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RetP35546 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.58□□□□□ -0.24
RetP35546 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RetP35546 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RetP35546 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
RetP35546 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.57□□□□□ -0.24
RetP35546 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.57□□□□□ -0.24
RetP35546 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
RetP35546 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Gm25287-201ENSMUST00000103846 110 ntBASIC13.57□□□□□ -0.24
RetP35546 Gm22918-201ENSMUST00000103855 110 ntBASIC13.57□□□□□ -0.24
RetP35546 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.57□□□□□ -0.24
RetP35546 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.57□□□□□ -0.24
RetP35546 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.57□□□□□ -0.24
RetP35546 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
RetP35546 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.57□□□□□ -0.24
RetP35546 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.57□□□□□ -0.24
RetP35546 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RetP35546 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RetP35546 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.56□□□□□ -0.24
RetP35546 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RetP35546 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.56□□□□□ -0.24
RetP35546 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.56□□□□□ -0.24
RetP35546 Gm16198-201ENSMUST00000118766 670 ntBASIC13.56□□□□□ -0.24
RetP35546 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.56□□□□□ -0.24
RetP35546 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.56□□□□□ -0.24
RetP35546 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RetP35546 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Gm2272-201ENSMUST00000194903 582 ntBASIC13.56□□□□□ -0.24
RetP35546 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RetP35546 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
RetP35546 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RetP35546 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RetP35546 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RetP35546 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms