Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.78□□□□□ -0.36
Cd28P31041 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cd28P31041 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.78□□□□□ -0.36
Cd28P31041 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.78□□□□□ -0.36
Cd28P31041 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.78□□□□□ -0.36
Cd28P31041 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cd28P31041 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.78□□□□□ -0.36
Cd28P31041 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.78□□□□□ -0.36
Cd28P31041 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.78□□□□□ -0.36
Cd28P31041 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.78□□□□□ -0.36
Cd28P31041 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd28P31041 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cd28P31041 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cd28P31041 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cd28P31041 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.77□□□□□ -0.36
Cd28P31041 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.77□□□□□ -0.37
Cd28P31041 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.77□□□□□ -0.37
Cd28P31041 Gm15372-201ENSMUST00000120729 834 ntBASIC12.77□□□□□ -0.37
Cd28P31041 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Cd28P31041 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.77□□□□□ -0.37
Cd28P31041 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cd28P31041 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.77□□□□□ -0.37
Cd28P31041 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Cd28P31041 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd28P31041 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.76□□□□□ -0.37
Cd28P31041 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.76□□□□□ -0.37
Cd28P31041 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cd28P31041 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.76□□□□□ -0.37
Cd28P31041 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.76□□□□□ -0.37
Cd28P31041 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.76□□□□□ -0.37
Cd28P31041 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cd28P31041 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cd28P31041 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cd28P31041 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd28P31041 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cd28P31041 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms