Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Nedd8P29595 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nedd8P29595 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.39□□□□□ -0.27
Nedd8P29595 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.39□□□□□ -0.27
Nedd8P29595 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.39□□□□□ -0.27
Nedd8P29595 Mir5130-201ENSMUST00000175160 84 ntBASIC13.39□□□□□ -0.27
Nedd8P29595 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.39□□□□□ -0.27
Nedd8P29595 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.39□□□□□ -0.27
Nedd8P29595 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.39□□□□□ -0.27
Nedd8P29595 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Nedd8P29595 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nedd8P29595 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nedd8P29595 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Nedd8P29595 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nedd8P29595 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.39□□□□□ -0.27
Nedd8P29595 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nedd8P29595 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nedd8P29595 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nedd8P29595 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nedd8P29595 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nedd8P29595 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Gm27389-201ENSMUST00000183622 195 ntBASIC13.38□□□□□ -0.27
Nedd8P29595 Gm30025-201ENSMUST00000218555 728 ntBASIC13.38□□□□□ -0.27
Nedd8P29595 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Gm5417-201ENSMUST00000079706 384 ntBASIC13.38□□□□□ -0.27
Nedd8P29595 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Nedd8P29595 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nedd8P29595 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nedd8P29595 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nedd8P29595 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.37□□□□□ -0.27
Nedd8P29595 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.37□□□□□ -0.27
Nedd8P29595 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.37□□□□□ -0.27
Nedd8P29595 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.37□□□□□ -0.27
Nedd8P29595 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Nedd8P29595 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms