Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.38□□□□□ -0.27
Cd40lgP27548 Gm11543-201ENSMUST00000120758 370 ntBASIC13.38□□□□□ -0.27
Cd40lgP27548 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cd40lgP27548 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.38□□□□□ -0.27
Cd40lgP27548 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.38□□□□□ -0.27
Cd40lgP27548 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cd40lgP27548 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.37□□□□□ -0.27
Cd40lgP27548 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.37□□□□□ -0.27
Cd40lgP27548 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cd40lgP27548 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40lgP27548 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gm4995-201ENSMUST00000117247 432 ntBASIC13.36□□□□□ -0.27
Cd40lgP27548 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.36□□□□□ -0.27
Cd40lgP27548 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.36□□□□□ -0.27
Cd40lgP27548 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.36□□□□□ -0.27
Cd40lgP27548 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cd40lgP27548 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.36□□□□□ -0.27
Cd40lgP27548 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms