Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.9□□□□□ -0.18
BdnfP21237 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BdnfP21237 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.9□□□□□ -0.18
BdnfP21237 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
BdnfP21237 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
BdnfP21237 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.89□□□□□ -0.19
BdnfP21237 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.89□□□□□ -0.19
BdnfP21237 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.89□□□□□ -0.19
BdnfP21237 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Gm13036-201ENSMUST00000117799 748 ntBASIC13.89□□□□□ -0.19
BdnfP21237 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.89□□□□□ -0.19
BdnfP21237 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Gm15590-201ENSMUST00000078419 552 ntBASIC13.89□□□□□ -0.19
BdnfP21237 Acot6-202ENSMUST00000222921 3622 ntBASIC13.89□□□□□ -0.19
BdnfP21237 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
BdnfP21237 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
BdnfP21237 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.89□□□□□ -0.19
BdnfP21237 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BdnfP21237 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
BdnfP21237 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
BdnfP21237 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.88□□□□□ -0.19
BdnfP21237 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.88□□□□□ -0.19
BdnfP21237 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
BdnfP21237 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
BdnfP21237 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
BdnfP21237 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
BdnfP21237 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms