Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Mir8102-201ENSMUST00000184148 139 ntBASIC16.75■□□□□ 0.27
Usp53P15975 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp53P15975 Gm46209-201ENSMUST00000217912 553 ntBASIC16.75■□□□□ 0.27
Usp53P15975 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp53P15975 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.75■□□□□ 0.27
Usp53P15975 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.75■□□□□ 0.27
Usp53P15975 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Usp53P15975 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Usp53P15975 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Usp53P15975 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Usp53P15975 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp53P15975 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Gm10275-202ENSMUST00000168697 495 ntBASIC16.74■□□□□ 0.27
Usp53P15975 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp53P15975 Gm43703-201ENSMUST00000200523 763 ntBASIC16.74■□□□□ 0.27
Usp53P15975 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Usp53P15975 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Gm10275-201ENSMUST00000092620 635 ntBASIC16.74■□□□□ 0.27
Usp53P15975 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp53P15975 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.74■□□□□ 0.27
Usp53P15975 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp53P15975 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Usp53P15975 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Usp53P15975 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Usp53P15975 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Gm7063-201ENSMUST00000186840 981 ntBASIC16.73■□□□□ 0.27
Usp53P15975 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.73■□□□□ 0.27
Usp53P15975 Mir125a-201ENSMUST00000083545 68 ntBASIC16.73■□□□□ 0.27
Usp53P15975 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp53P15975 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp53P15975 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp53P15975 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp53P15975 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Usp53P15975 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Usp53P15975 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.72■□□□□ 0.27
Usp53P15975 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.72■□□□□ 0.27
Usp53P15975 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp53P15975 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Usp53P15975 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp53P15975 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp53P15975 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp53P15975 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.72■□□□□ 0.27
Usp53P15975 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.72■□□□□ 0.27
Usp53P15975 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Gm2423-201ENSMUST00000074863 733 ntBASIC16.72■□□□□ 0.27
Usp53P15975 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Usp53P15975 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp53P15975 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms