Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ApoeP08226 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.71□□□□□ -0.21
ApoeP08226 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.71□□□□□ -0.21
ApoeP08226 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.71□□□□□ -0.21
ApoeP08226 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.71□□□□□ -0.21
ApoeP08226 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ApoeP08226 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
ApoeP08226 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
ApoeP08226 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.71□□□□□ -0.22
ApoeP08226 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ApoeP08226 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ApoeP08226 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ApoeP08226 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.7□□□□□ -0.22
ApoeP08226 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.7□□□□□ -0.22
ApoeP08226 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.7□□□□□ -0.22
ApoeP08226 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.7□□□□□ -0.22
ApoeP08226 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.7□□□□□ -0.22
ApoeP08226 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ApoeP08226 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.7□□□□□ -0.22
ApoeP08226 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.7□□□□□ -0.22
ApoeP08226 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ApoeP08226 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ApoeP08226 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ApoeP08226 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
ApoeP08226 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ApoeP08226 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.7□□□□□ -0.22
ApoeP08226 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.69□□□□□ -0.22
ApoeP08226 Gm5682-201ENSMUST00000173402 505 ntBASIC13.69□□□□□ -0.22
ApoeP08226 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ApoeP08226 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.69□□□□□ -0.22
ApoeP08226 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ApoeP08226 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ApoeP08226 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
ApoeP08226 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
ApoeP08226 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ApoeP08226 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.68□□□□□ -0.22
ApoeP08226 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.68□□□□□ -0.22
ApoeP08226 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.68□□□□□ -0.22
ApoeP08226 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ApoeP08226 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ApoeP08226 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms