Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm25745-201ENSMUST00000174945 133 ntBASIC12.74□□□□□ -0.37
P04224 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.74□□□□□ -0.37
P04224 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.74□□□□□ -0.37
P04224 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
P04224 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P04224 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
P04224 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.74□□□□□ -0.37
P04224 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.74□□□□□ -0.37
P04224 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.73□□□□□ -0.37
P04224 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.73□□□□□ -0.37
P04224 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P04224 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P04224 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
P04224 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Gm15165-201ENSMUST00000118140 502 ntBASIC12.73□□□□□ -0.37
P04224 Gm8344-201ENSMUST00000119813 856 ntBASIC12.73□□□□□ -0.37
P04224 Olfr129-201ENSMUST00000122318 993 ntBASIC12.73□□□□□ -0.37
P04224 Gm27742-201ENSMUST00000184667 60 ntBASIC12.73□□□□□ -0.37
P04224 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.73□□□□□ -0.37
P04224 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.73□□□□□ -0.37
P04224 Gm18622-201ENSMUST00000219361 595 ntBASIC12.73□□□□□ -0.37
P04224 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.73□□□□□ -0.37
P04224 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.73□□□□□ -0.37
P04224 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
P04224 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P04224 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
P04224 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04224 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P04224 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P04224 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P04224 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
P04224 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P04224 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.72□□□□□ -0.37
P04224 Gm6659-201ENSMUST00000174752 547 ntBASIC12.72□□□□□ -0.37
P04224 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.72□□□□□ -0.37
P04224 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.72□□□□□ -0.37
P04224 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P04224 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P04224 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04224 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
P04224 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04224 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.71□□□□□ -0.37
P04224 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04224 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.71□□□□□ -0.37
P04224 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.71□□□□□ -0.37
P04224 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.71□□□□□ -0.37
P04224 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04224 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04224 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.71□□□□□ -0.37
P04224 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.71□□□□□ -0.37
P04224 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.71□□□□□ -0.37
P04224 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.71□□□□□ -0.37
P04224 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
P04224 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.71□□□□□ -0.37
P04224 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms