Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Apaf1O88879 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Gm13453-201ENSMUST00000118708 357 ntBASIC18.81■□□□□ 0.6
Apaf1O88879 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Gm23547-201ENSMUST00000158210 271 ntBASIC18.81■□□□□ 0.6
Apaf1O88879 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Apaf1O88879 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Apaf1O88879 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Apaf1O88879 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Apaf1O88879 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Apaf1O88879 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.81■□□□□ 0.6
Apaf1O88879 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.81■□□□□ 0.6
Apaf1O88879 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Apaf1O88879 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.81■□□□□ 0.6
Apaf1O88879 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Apaf1O88879 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Apaf1O88879 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.8■□□□□ 0.6
Apaf1O88879 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Mir7023-201ENSMUST00000185093 64 ntBASIC18.8■□□□□ 0.6
Apaf1O88879 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.8■□□□□ 0.6
Apaf1O88879 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apaf1O88879 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Apaf1O88879 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Gm14042-201ENSMUST00000120139 833 ntBASIC18.79■□□□□ 0.6
Apaf1O88879 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Apaf1O88879 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.79■□□□□ 0.6
Apaf1O88879 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Gm27989-201ENSMUST00000184721 107 ntBASIC18.79■□□□□ 0.6
Apaf1O88879 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.79■□□□□ 0.6
Apaf1O88879 Gm9063-201ENSMUST00000223299 582 ntBASIC18.79■□□□□ 0.6
Apaf1O88879 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Apaf1O88879 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Apaf1O88879 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Apaf1O88879 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Apaf1O88879 BC001981-202ENSMUST00000191393 1545 ntBASIC18.79■□□□□ 0.6
Apaf1O88879 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Apaf1O88879 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Apaf1O88879 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Apaf1O88879 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Apaf1O88879 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.78■□□□□ 0.6
Apaf1O88879 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Apaf1O88879 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Apaf1O88879 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Apaf1O88879 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 241.7 ms